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  5. Aob_g30123

Aob_g30123 (ATVTI13, VTI13)


Aliases : ATVTI13, VTI13

Description : Qb-type VTI-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0002267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002267_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g30123
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
Dac_g04060 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Lfl_g21752 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Mp1g12970.1 SGR4, ZIG1,... VTI group Qb-type SNARE protein 0.02 OrthoFinder output from all 47 species
Nbi_g00258 ATVTI13, VTI13 Qb-type VTI-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Pir_g01144 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Smo146421 SGR4, ZIG1,... Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Spa_g06947 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007705 Vesicle_trsprt_v-SNARE_N 12 90
No external refs found!