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  5. Aob_g29919

Aob_g29919 (PP2-A1, ATPP2-A1, ATPP2A-1)


Aliases : PP2-A1, ATPP2-A1, ATPP2A-1

Description : not classified & original description: none


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g29919

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00115850 PP2-A15,... Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
AT1G56250 PP2-B14, AtPP2-B14 phloem protein 2-B14 0.03 OrthoFinder output from all 47 species
AT1G63090 PP2-A11, AtPP2-A11 phloem protein 2-A11 0.03 OrthoFinder output from all 47 species
AT2G02280 PP2-B4, AtPP2-B4 phloem protein 2-B4 0.03 OrthoFinder output from all 47 species
AT4G19850 ATPP2-A2, PP2-A2, PP2A2 lectin-related 0.04 OrthoFinder output from all 47 species
Aob_g24739 AtPP2-B9, SKIP3 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g25309 PP2-A1,... not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g33181 PP2-B15, AtPP2-B15 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene55189.t1 Aspi01Gene55189 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55189.t2 ATPP2-A4,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0322.g064524 No alias not classified & original description: CDS=1-477 0.03 OrthoFinder output from all 47 species
Cba_g38846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003897001 AtPP2-B10, PP2-B10 F-box protein At2g02240 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os04g48270.3 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Lfl_g24670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10426431g0010 AtPP2-B6, PP2-B6 F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10430103g0010 AtPP2-B10, PP2-B10 F-box protein PP2-B1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_10434357g0020 PP2-B15, AtPP2-B15 F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp1g08180.1 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Pir_g38746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017743 PP2-A15, AtPP2-A15 not classified & original description: CDS=224-1150 0.02 OrthoFinder output from all 47 species
Smo271662 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc02g069020.3.1 PP2-A1,... Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc05g053620.3.1 AtPP2-B10,... Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g051160.2.1 MEE66, Solyc10g051160 Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc10g085490.3.1 PP2-A15,... component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035434 copper ion transmembrane transport IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025886 PP2-like 93 242
No external refs found!