Aob_g29203


Description : GeBP-type transcription factor & original description: none


Gene families : OG0003910 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003910_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g29203
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AT4G00250 No alias DNA-binding storekeeper protein-related transcriptional regulator 0.03 OrthoFinder output from all 47 species
LOC_Os03g25430.1 LOC_Os03g25430 transcription factor (GeBP) 0.02 OrthoFinder output from all 47 species
LOC_Os07g44200.1 LOC_Os07g44200 transcription factor (GeBP) 0.03 OrthoFinder output from all 47 species
Pir_g42379 No alias GeBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g014740.2.1 Solyc02g014740 transcription factor (GeBP) 0.04 OrthoFinder output from all 47 species
Solyc02g014750.2.1 Solyc02g014750 transcription factor (GeBP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR007592 GEBP 27 122
No external refs found!