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Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00243230 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g06657 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g18190 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g37868 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g38141 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g22420 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g30812 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g27830 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g23980 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g31824 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g33229 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g67754 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g67889 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g69416 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g70862 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene34104.t1 | OTP84, Aspi01Gene34104 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene65602.t1 | Aspi01Gene65602 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000903 | EMB2261 | not classified & original description: CDS=1-2043 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0081.g038564 | EMB2758 | not classified & original description: CDS=1-2661 | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0179.g056242 | No alias | not classified & original description: CDS=1-2559 | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.10G047500.1 | Ceric.10G047500 | not classified & original description: pacid=50612222... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.37G022300.1 | CRR22, Ceric.37G022300 | not classified & original description: pacid=50616680... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000383.101 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020553.200 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g08184 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g38580 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g05905 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g35440 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_11981 | REME1 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g60250.1 | LOC_Os01g60250 | Pentatricopeptide repeat-containing protein At3g14730... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g56850.1 | LOC_Os03g56850 | Pentatricopeptide repeat-containing protein At4g21300... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g14130.1 | LOC_Os04g14130 | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g45850.1 | LOC_Os05g45850 | Pentatricopeptide repeat-containing protein At4g33170... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g20420.1 | LOC_Os07g20420 | Pentatricopeptide repeat-containing protein At3g26782,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g04400.1 | LOC_Os08g04400 | Pentatricopeptide repeat-containing protein At5g50390,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g34870.1 | LOC_Os09g34870 | Pentatricopeptide repeat-containing protein At2g36980,... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os12g06070.1 | LOC_Os12g06070 | Pentatricopeptide repeat-containing protein At5g04780,... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g39306 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g03043 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g03200 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g19959 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g21836 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g24442 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g35307 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g43227 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g60920 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g62128 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g63656 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g15488 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30309 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g051480.1.1 | OTP84, Solyc04g051480 | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g05998 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g26745 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g45291 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e003605_P001 | DOT4, Zm00001e003605 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011467_P004 | emb1899, EMB175,... | Pentatricopeptide repeat-containing protein At5g03800... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e034478_P001 | Zm00001e034478 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| MF | GO:0008417 | fucosyltransferase activity | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 307 | 354 |
| IPR002885 | Pentatricopeptide_repeat | 106 | 152 |
| IPR002885 | Pentatricopeptide_repeat | 5 | 53 |
| IPR002885 | Pentatricopeptide_repeat | 206 | 254 |
| IPR002885 | Pentatricopeptide_repeat | 410 | 455 |
| IPR046848 | E_motif | 527 | 573 |
| IPR002885 | Pentatricopeptide_repeat | 484 | 507 |
| IPR002885 | Pentatricopeptide_repeat | 383 | 403 |
| No external refs found! |