- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00062590 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00053p00090700 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g13880... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00077p00031710 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G18485 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G39620 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G22150 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G09950 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g001971 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g003781 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g005693 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g005795 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g016117 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g025630 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g041176 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g082818 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g101245 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g101277 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g113395 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g07273 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06335 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g06396 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g06398 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g12661 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18767 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g39732 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g05337 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g06037 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g06038 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g27291 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g27880 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28228 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28662 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene46907.t1 | REME1, Aspi01Gene46907 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0049.g030697 | No alias | not classified & original description: CDS=1-2361 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05269 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06571 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20881 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g76849 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G052000.1 | Ceric.13G052000 | not classified & original description: pacid=50635571... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.22G078800.1 | Ceric.22G078800 | not classified & original description: pacid=50613807... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.25G042100.1 | Ceric.25G042100 | not classified & original description: pacid=50593153... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.34G057600.1 | Ceric.34G057600 | not classified & original description: pacid=50623573... | 0.05 | OrthoFinder output from all 47 species | |
| Cre12.g483700 | OSB4 | Cell cycle.organelle machineries.DNA... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g18428 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g24501 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g31017 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g31221 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07741 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08271 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08927 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08966 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g16678 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g16793 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g17307 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g21480 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g26235 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g26239 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g35843 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g36545 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g37663 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g40976 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g43181 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g47933 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g16108 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g22315 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g26440 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g40992 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g15835 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01000178001 | No alias | RNA processing.organelle machineries.RNA... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01000244001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01003957001 | No alias | Pentatricopeptide repeat-containing protein At5g65570... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015466001 | LPA66 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017209001 | VAC1, ECB2, ATECB2 | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017365001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01021756001 | No alias | Pentatricopeptide repeat-containing protein At4g21300... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01036142001 | No alias | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g03311 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04365 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g18272 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g28084 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g43456 | DOT4 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g44138 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g47776 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g10855 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g13946 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_187514g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g03944 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g14089 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g05482 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g25468 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g03998 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12989 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g63626 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63873 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g22601 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23106 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g53359 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g55456 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0029.g010017 | No alias | not classified & original description: CDS=111-3410 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0065.g016059 | No alias | not classified & original description: CDS=25-3486 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0080.g017928 | No alias | not classified & original description: CDS=112-2919 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g03385 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g14049 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g14712 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16013 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g18597 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g19460 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g29223 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g37838 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g39247 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g51766 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g01551 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g02585 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g08436 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g26518 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g27392 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g33733 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g50449 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06658 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g10853 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g11066 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g23009 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g29860 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015440_P001 | CRR22, Zm00001e015440 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e020442_P001 | Zm00001e020442 | Pentatricopeptide repeat-containing protein At4g21300... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e041048_P001 | OTP86, Zm00001e041048 | RNA editing factor (OTP86) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 2 | 18 |
| IPR002885 | Pentatricopeptide_repeat | 125 | 155 |
| IPR002885 | Pentatricopeptide_repeat | 500 | 525 |
| IPR002885 | Pentatricopeptide_repeat | 198 | 220 |
| IPR002885 | Pentatricopeptide_repeat | 226 | 255 |
| IPR002885 | Pentatricopeptide_repeat | 401 | 426 |
| IPR002885 | Pentatricopeptide_repeat | 21 | 68 |
| IPR002885 | Pentatricopeptide_repeat | 325 | 372 |
| IPR002885 | Pentatricopeptide_repeat | 427 | 472 |
| IPR046848 | E_motif | 543 | 605 |
| No external refs found! |