1. Home
  2. Species
  3. Abrodictyum obscurum
  4. Sequence
  5. Aob_g26984

Aob_g26984 (MBD05, MBD5, ATMBD5)


Aliases : MBD05, MBD5, ATMBD5

Description : methylation reader *(MBD5-6) & original description: none


Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g26984

Target Alias Description ECC score Gene Family Method Actions
Ala_g10102 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15671 No alias methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55862.t1 MBD05, MBD5,... methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60608.t1 MBD05, MBD5,... methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0126.g048602 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: CDS=313-1701 0.02 OrthoFinder output from all 47 species
Dac_g09576 No alias methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g09713 MBD05, MBD5, ATMBD5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38746 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g37242 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04548 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g28701 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002716 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: CDS=802-2949 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 437 486
No external refs found!