1. Home
  2. Species
  3. Abrodictyum obscurum
  4. Sequence
  5. Aob_g25375

Aob_g25375 (ARPN)


Aliases : ARPN

Description : not classified & original description: none


Gene families : OG0000045 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g25375

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00048790 AtENODL6,... Early nodulin-like protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01003354001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os12g05470.1 LOC_Os12g05470 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_185096g0010 ARPN Basic blue protein OS=Cucumis sativus... 0.05 OrthoFinder output from all 47 species
Mp2g14890.1 No alias Mavicyanin OS=Cucurbita pepo (sp|p80728|mavi_cucpe : 82.4) 0.02 OrthoFinder output from all 47 species
Nbi_g25073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g088380.4.1 ENODL20,... Lamin-like protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc07g052660.1.1 AtENODL18,... Uclacyanin 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g007070.4.1 AtENODL1,... Early nodulin-like protein 1 OS=Oryza sativa subsp.... 0.08 OrthoFinder output from all 47 species
Solyc11g017305.1.1 Solyc11g017305 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR003245 Phytocyanin_dom 45 122
No external refs found!