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  5. Aob_g24190

Aob_g24190


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000970 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000970_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g24190
Cluster HCCA: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
Aev_g33001 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04973 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.38G044200.1 Ceric.38G044200 Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g19704 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25573 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g48690.1 LOC_Os05g48690 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
MA_6829664g0010 No alias transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Ore_g30329 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26369 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 148 238
No external refs found!