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  5. Aob_g23989

Aob_g23989 (GR-RBP3)


Aliases : GR-RBP3

Description : not classified & original description: none


Gene families : OG0010612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010612_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g23989
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Adi_g030553 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g037441 CP31B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g40773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g41791 PDE322, CP33 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003796 lysozyme activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006027 glycosaminoglycan catabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008174 mRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009253 peptidoglycan catabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0030203 glycosaminoglycan metabolic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0061783 peptidoglycan muralytic activity IEP HCCA
BP GO:0080009 mRNA methylation IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 22 90
IPR000504 RRM_dom 227 299
No external refs found!