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  5. Aob_g23746

Aob_g23746


Description : component *(MSD1) of Katanin-recruiting microtubule-anchoring complex & original description: none


Gene families : OG0003894 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003894_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g23746

Target Alias Description ECC score Gene Family Method Actions
AT5G57410 No alias Afadin/alpha-actinin-binding protein 0.03 OrthoFinder output from all 47 species
Aop_g05348 No alias component *(MSD1) of Katanin-recruiting... 0.02 OrthoFinder output from all 47 species
Dcu_g04569 No alias component *(MSD1) of Katanin-recruiting... 0.04 OrthoFinder output from all 47 species
Lfl_g10079 No alias component *(MSD1) of Katanin-recruiting... 0.03 OrthoFinder output from all 47 species
Msp_g19963 No alias component *(MSD1) of Katanin-recruiting... 0.04 OrthoFinder output from all 47 species
Pir_g10311 No alias component *(MSD1) of Katanin-recruiting... 0.03 OrthoFinder output from all 47 species
Sam_g52470 No alias component *(MSD1) of Katanin-recruiting... 0.03 OrthoFinder output from all 47 species
Tin_g24464 No alias component *(MSD1) of Katanin-recruiTing... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR021622 Afadin/alpha-actinin-bd 117 263
No external refs found!