Aliases : EMB1989, RPB2, NRPB2
Description : not classified & original description: none
Gene families : OG0000511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000511_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aob_g22504 | |
Cluster | HCCA: Cluster_36 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g061129 | EMB1989, RPB2, NRPB2 | component *(NRPB2) of RNA polymerase II complex &... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene14109.t2 | NRPD2B, Aspi01Gene14109 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene30461.t2 | DRD2, NRPE2,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pp3c16_10710V3.1 | Pp3c16_10710 | DNA-directed RNA polymerase family protein | 0.01 | OrthoFinder output from all 47 species | |
Pp3c21_8540V3.1 | NRPC2, Pp3c21_8540 | nuclear RNA polymerase C2 | 0.01 | OrthoFinder output from all 47 species | |
Pp3c3_35890V3.1 | Pp3c3_35890 | DNA-directed RNA polymerase family protein | 0.01 | OrthoFinder output from all 47 species | |
Pp3c5_18580V3.1 | EMB1989, RPB2,... | nuclear RNA polymerase A2 | 0.01 | OrthoFinder output from all 47 species | |
Pp3c9_12670V3.1 | EMB1989, RPB2,... | DNA-directed RNA polymerase family protein | 0.01 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEA | Interproscan |
BP | GO:0006351 | DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000295 | adenine nucleotide transmembrane transporter activity | IEP | HCCA |
MF | GO:0005346 | purine ribonucleotide transmembrane transporter activity | IEP | HCCA |
MF | GO:0005347 | ATP transmembrane transporter activity | IEP | HCCA |
MF | GO:0005471 | ATP:ADP antiporter activity | IEP | HCCA |
BP | GO:0006862 | nucleotide transport | IEP | HCCA |
MF | GO:0008514 | organic anion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015215 | nucleotide transmembrane transporter activity | IEP | HCCA |
MF | GO:0015216 | purine nucleotide transmembrane transporter activity | IEP | HCCA |
MF | GO:0015217 | ADP transmembrane transporter activity | IEP | HCCA |
MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0015297 | antiporter activity | IEP | HCCA |
MF | GO:0015605 | organophosphate ester transmembrane transporter activity | IEP | HCCA |
BP | GO:0015748 | organophosphate ester transport | IEP | HCCA |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | HCCA |
MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | HCCA |
MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007644 | RNA_pol_bsu_protrusion | 33 | 183 |
No external refs found! |