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  5. Aob_g20695

Aob_g20695 (LBD37, ASL39)


Aliases : LBD37, ASL39

Description : AS2/LOB-type transcription factor & original description: none


Gene families : OG0001073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g20695
Cluster HCCA: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
AT1G68510 LBD42 LOB domain-containing protein 42 0.03 OrthoFinder output from all 47 species
Aop_g02104 LBD38 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38372.t1 LBD38, Aspi01Gene38372 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008284001 LBD40 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 OrthoFinder output from all 47 species
GSVIVT01011896001 LBD42 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 OrthoFinder output from all 47 species
GSVIVT01031035001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 OrthoFinder output from all 47 species
Gb_36942 LBD40 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
LOC_Os01g32770.1 LBD41, LOC_Os01g32770 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
LOC_Os03g41330.1 LBD37, ASL39,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
MA_19934g0010 LBD40 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
MA_70989g0010 LBD40 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Sam_g07374 No alias AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g119530.3.1 LBD41, Solyc03g119530 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Solyc04g077990.3.1 LBD38, Solyc04g077990 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Zm00001e005129_P001 LBD37, ASL39,... transcription factor (AS2/LOB) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1990380 K48-linked deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 2 101
No external refs found!