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  5. Aob_g20560

Aob_g20560


Description : not classified & original description: none


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g20560
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00089620 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.02 OrthoFinder output from all 47 species
Adi_g019390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36971 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36973 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38627 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g39481 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g42673 CSA1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g50407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034461001 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.02 OrthoFinder output from all 47 species
MA_180319g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Pp3c10_20790V3.1 Pp3c10_20790 disease resistance protein (TIR-NBS-LRR class) 0.02 OrthoFinder output from all 47 species
Solyc01g008800.3.1 Solyc01g008800 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Spa_g25183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07543 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
CC GO:0042579 microbody IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 19 146
No external refs found!