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  5. Aob_g19932

Aob_g19932 (RGL1, RGL)


Aliases : RGL1, RGL

Description : GRAS-type transcription factor *(RAD1) & original description: none


Gene families : OG0001108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g19932
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00270570 RGL2,... External stimuli response.biotic... 0.06 OrthoFinder output from all 47 species
AMTR_s00016p00207840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00058940 RGL1, RGL,... External stimuli response.biotic... 0.02 OrthoFinder output from all 47 species
AT1G66350 RGL1, RGL RGA-like 1 0.03 OrthoFinder output from all 47 species
Ala_g27684 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene45973.t1 RGL1, RGL,... GRAS-type transcription factor *(RAD1) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0460.g072066 RGA2, GAI GRAS-type transcription factor & original description: CDS=1-2034 0.03 OrthoFinder output from all 47 species
Dcu_g25487 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.07 OrthoFinder output from all 47 species
Dcu_g50393 RGL2 GRAS-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
GSVIVT01007532001 RGA2, GAI RNA biosynthesis.transcriptional activation.GRAS... 0.05 OrthoFinder output from all 47 species
GSVIVT01011710001 RGA, RGA1 RNA biosynthesis.transcriptional activation.GRAS... 0.04 OrthoFinder output from all 47 species
LOC_Os05g49930.1 RGA2, GAI, LOC_Os05g49930 DELLA-type gibberellin signal transducer. transcription... 0.03 OrthoFinder output from all 47 species
LOC_Os11g31100.1 RGL1, RGL, LOC_Os11g31100 DELLA-type gibberellin signal transducer. transcription... 0.07 OrthoFinder output from all 47 species
Len_g27753 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.02 OrthoFinder output from all 47 species
Len_g48752 RGL1, RGL GRAS-type transcription factor & original description: none 0.16 OrthoFinder output from all 47 species
Msp_g35839 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.08 OrthoFinder output from all 47 species
Msp_g37454 RGA2, GAI GRAS-type transcription factor *(RAD1) & original... 0.07 OrthoFinder output from all 47 species
Msp_g38765 SCR, SGR1 GRAS-type transcription factor *(RAD1) & original... 0.09 OrthoFinder output from all 47 species
Ore_g03910 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.02 OrthoFinder output from all 47 species
Ore_g26688 RGA, RGA1 GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g27974 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.05 OrthoFinder output from all 47 species
Ore_g28416 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.03 OrthoFinder output from all 47 species
Ore_g29234 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.05 OrthoFinder output from all 47 species
Ore_g33996 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.04 OrthoFinder output from all 47 species
Ore_g37064 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.03 OrthoFinder output from all 47 species
Ore_g37498 SCR, SGR1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23797 RGA2, GAI GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g01866 RGA2, GAI GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g37316 RGL2 GRAS-type transcription factor *(RAD1) & original... 0.04 OrthoFinder output from all 47 species
Tin_g40110 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.06 OrthoFinder output from all 47 species
Zm00001e018934_P001 RGL3, Zm00001e018934 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 420 781
No external refs found!