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  5. Aob_g19904

Aob_g19904 (COB)


Aliases : COB

Description : regulatory protein *(COB) of cellulose-hemicellulose network assembly & original description: none


Gene families : OG0000498 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000498_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g19904

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00083860 COB,... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.04 OrthoFinder output from all 47 species
AMTR_s00066p00182490 COBL10,... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.03 OrthoFinder output from all 47 species
AT3G20580 COBL10 COBRA-like protein 10 precursor 0.02 OrthoFinder output from all 47 species
AT4G27110 COBL11 COBRA-like protein 11 precursor 0.03 OrthoFinder output from all 47 species
AT5G15630 IRX6, COBL4 COBRA-like extracellular glycosyl-phosphatidyl... 0.02 OrthoFinder output from all 47 species
Aev_g17419 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
Aev_g36598 IRX6, COBL4 regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Ala_g14783 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
Ala_g25247 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Als_g46102 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
Aop_g04105 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Aspi01Gene09022.t1 COBL1, Aspi01Gene09022 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Aspi01Gene35118.t1 COBL2, Aspi01Gene35118 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Azfi_s0068.g036477 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Cba_g13589 SEB1, COBL7, ATSEB1 regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
Ceric.25G025100.1 COBL2, Ceric.25G025100 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Ceric.30G011700.1 SEB1, COBL7,... regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Dac_g00727 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Dac_g14621 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
GSVIVT01008128001 COB Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.03 OrthoFinder output from all 47 species
GSVIVT01008129001 IRX6, COBL4 Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.05 OrthoFinder output from all 47 species
GSVIVT01012641001 COBL10 Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.03 OrthoFinder output from all 47 species
GSVIVT01036565001 IRX6, COBL4 Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.05 OrthoFinder output from all 47 species
Gb_25603 COBL1 COB cellulose microfibrils and hemicellulose interaction protein 0.06 OrthoFinder output from all 47 species
LOC_Os03g30250.1 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.04 OrthoFinder output from all 47 species
LOC_Os03g54750.1 COB, LOC_Os03g54750 COB cellulose microfibrils and hemicellulose interaction protein 0.02 OrthoFinder output from all 47 species
LOC_Os05g32110.1 COB, LOC_Os05g32110 COB cellulose microfibrils and hemicellulose interaction protein 0.02 OrthoFinder output from all 47 species
LOC_Os06g47110.1 COBL10, LOC_Os06g47110 COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
LOC_Os07g49080.1 SEB1, COBL7,... COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
Len_g16254 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Len_g43876 COBL1 regulatory protein *(COB) of cellulose-hemicellulose... 0.05 OrthoFinder output from all 47 species
MA_40967g0020 COB COB cellulose microfibrils and hemicellulose interaction protein 0.05 OrthoFinder output from all 47 species
Mp1g17600.1 COBL11 COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
Mp7g06600.1 COBL1 COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
Ore_g28453 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.06 OrthoFinder output from all 47 species
Ore_g34445 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Pnu_g20839 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Pnu_g31692 SEB1, COBL7, ATSEB1 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Smo271954 COBL1 Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.03 OrthoFinder output from all 47 species
Solyc01g103860.4.1 COBL6, Solyc01g103860 COB cellulose microfibrils and hemicellulose interaction protein 0.02 OrthoFinder output from all 47 species
Solyc02g080240.2.1 COBL10, Solyc02g080240 COBRA-like protein 10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g070440.4.1 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
Solyc03g114890.4.1 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.02 OrthoFinder output from all 47 species
Solyc03g114900.3.1 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
Solyc07g064200.4.1 COBL10, Solyc07g064200 COB cellulose microfibrils and hemicellulose interaction protein 0.02 OrthoFinder output from all 47 species
Solyc09g075540.1.1 SEB1, COBL7,... COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
Solyc10g006450.3.1 COBL10, Solyc10g006450 COB cellulose microfibrils and hemicellulose interaction protein 0.02 OrthoFinder output from all 47 species
Spa_g13676 COBL1 regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
Tin_g29852 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
Zm00001e035133_P001 COBL10, Zm00001e035133 COB cellulose microfibrils and hemicellulose interaction protein 0.04 OrthoFinder output from all 47 species
Zm00001e038043_P001 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006918 COBRA_pln 44 214
No external refs found!