Lfl_g22917


Description : not classified & original description: none


Gene families : OG0001573 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001573_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g22917
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AT5G61250 AtGUS1, GUS1 glucuronidase 1 0.03 OrthoFinder output from all 47 species
Aev_g30183 GUS3, AtGUS3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08611 GUS3, AtGUS3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0040.g026667 GUS3, AtGUS3 not classified & original description: CDS=289-1803 0.04 OrthoFinder output from all 47 species
Gb_17663 AtGUS2, GUS2 Heparanase-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g55870.1 GUS3, AtGUS3,... Heparanase-like protein 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os06g08090.1 GUS3, AtGUS3,... Heparanase-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g19826 GUS3, AtGUS3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo105931 GUS3, AtGUS3 Heparanase-like protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo133100 GUS3, AtGUS3 Heparanase-like protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Zm00001e003018_P001 AtGUS2, GUS2,... Heparanase-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR005199 Glyco_hydro_79 1 95
No external refs found!