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  5. Aob_g18932

Aob_g18932


Description : rRNA adenosine dimethylase *(DIM1A) & original description: none


Gene families : OG0002989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002989_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g18932

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00244930 evm_27.TU.AmTr_v1... RNA processing.RNA modification.rRNA/tRNA... 0.02 OrthoFinder output from all 47 species
Adi_g050774 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018854001 No alias RNA processing.RNA modification.rRNA/tRNA... 0.02 OrthoFinder output from all 47 species
MA_10429808g0010 No alias Ribosomal RNA small subunit methyltransferase... 0.02 OrthoFinder output from all 47 species
Smo116036 No alias RNA processing.RNA modification.rRNA/tRNA... 0.03 OrthoFinder output from all 47 species
Solyc01g100430.3.1 Solyc01g100430 rRNA adenosine dimethylase (DIM1A) 0.03 OrthoFinder output from all 47 species
Tin_g06535 No alias rRNA adenosine dimethylase *(DIM1A) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013790_P001 Zm00001e013790 rRNA adenosine dimethylase (DIM1A) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001737 KsgA/Erm 24 241
No external refs found!