Aob_g18076 (CID4)


Aliases : CID4

Description : not classified & original description: none


Gene families : OG0002546 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002546_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g18076

Target Alias Description ECC score Gene Family Method Actions
AT3G14010 CID4 CTC-interacting domain 4 0.02 OrthoFinder output from all 47 species
Aev_g33923 CID4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20165 CID4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07027.t1 CID3, Aspi01Gene07027 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24223 CID4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16328 CID4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g29292 CID3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07109 CID4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427918g0010 CID4 Polyadenylate-binding protein-interacting protein 4... 0.02 OrthoFinder output from all 47 species
Mp7g15450.1 CID4 Polyadenylate-binding protein-interacting protein 4... 0.03 OrthoFinder output from all 47 species
Msp_g13708 CID4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29630 CID4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05846 CID4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03955 CID4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g121950.3.1 CID4, Solyc03g121950 Polyadenylate-binding protein-interacting protein 4... 0.02 OrthoFinder output from all 47 species
Zm00001e014564_P004 CID4, Zm00001e014564 Polyadenylate-binding protein-interacting protein 3... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009604 LsmAD_domain 266 335
IPR025852 SM_dom_ATX 104 190
No external refs found!