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  5. Aob_g17841

Aob_g17841


Description : not classified & original description: none


Gene families : OG0004086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004086_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g17841
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Aev_g07861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30661 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G012900.1 Ceric.18G012900 not classified & original description: pacid=50621650... 0.03 OrthoFinder output from all 47 species
GSVIVT01029286001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_10298 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g41930.1 LOC_Os12g41930 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g14560.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g20105 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18313 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g38099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g008330.3.1 Solyc07g008330 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e018124_P001 Zm00001e018124 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP HCCA
BP GO:0050684 regulation of mRNA processing IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0080009 mRNA methylation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007718 Srp40_C 529 601
No external refs found!