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  5. Aob_g17595

Aob_g17595


Description : protease *(SBT5) & original description: none


Gene families : OG0000027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g17595

Target Alias Description ECC score Gene Family Method Actions
Aev_g13429 ATSBT5.4, SBT5.4 protease *(SBT5) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39913 No alias protease *(SBT2) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24047 No alias protease *(SBT2) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0128.g048755 AIR3 protease *(SBT5) & original description: CDS=431-2821 0.03 OrthoFinder output from all 47 species
GSVIVT01009474001 No alias Subtilisin-like protease SBT1.9 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
MA_10435307g0010 No alias Subtilisin-like protease SBT3.6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_734639g0010 ARA12 protease (SBT1) 0.02 OrthoFinder output from all 47 species
Ore_g29145 ARA12 protease *(SBT1) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23369 AIR3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08398 No alias protease *(SBT1) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011346 No alias not classified & original description: CDS=1-774 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0229.g026396 AIR3 not classified & original description: CDS=1-1875 0.03 OrthoFinder output from all 47 species
Sam_g09582 No alias protease *(SBT5) & original description: none 0.02 OrthoFinder output from all 47 species
Smo416154 No alias Subtilisin-like protease SBT1.5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc03g006970.1.1 ATSBT1.3,... protease (SBT1) 0.02 OrthoFinder output from all 47 species
Solyc03g044150.4.1 ARA12, Solyc03g044150 protease (SBT1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008236 serine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR010259 S8pro/Inhibitor_I9 49 128
IPR000209 Peptidase_S8/S53_dom 163 641
IPR041469 Subtilisin-like_FN3 708 803
IPR003137 PA_domain 437 510
No external refs found!