Aob_g17323


Description : not classified & original description: none


Gene families : OG0001104 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001104_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g17323

Target Alias Description ECC score Gene Family Method Actions
AT2G01390 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g117048 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02893 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019040001 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.02 OrthoFinder output from all 47 species
LOC_Os01g07340.1 LOC_Os01g07340 Pentatricopeptide repeat-containing protein At5g66631... 0.03 OrthoFinder output from all 47 species
Len_g59567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016802_P001 Zm00001e016802 Pentatricopeptide repeat-containing protein At5g66631... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 254 303
IPR002885 Pentatricopeptide_repeat 187 229
IPR033443 PPR_long 516 686
IPR002885 Pentatricopeptide_repeat 154 174
No external refs found!