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  5. Aob_g16932

Aob_g16932 (ATCRSH, CRSH)


Aliases : ATCRSH, CRSH

Description : ppGpp synthetase *(CRSH) & original description: none


Gene families : OG0003616 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003616_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g16932

Target Alias Description ECC score Gene Family Method Actions
AT3G17470 ATCRSH, CRSH Ca2+-activated RelA/spot homolog 0.03 OrthoFinder output from all 47 species
Adi_g017331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26038 ATCRSH, CRSH ppGpp synthetase *(CRSH) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0090.g042641 ATCRSH, CRSH ppGpp synthetase *(CRSH) & original description: CDS=758-4711 0.03 OrthoFinder output from all 47 species
Ceric.30G071200.1 Ceric.30G071200 not classified & original description: pacid=50608643... 0.05 OrthoFinder output from all 47 species
Dac_g36475 ATCRSH, CRSH ppGpp synthetase *(CRSH) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02034 ATCRSH, CRSH ppGpp synthetase *(CRSH) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017689001 ATCRSH, CRSH Probable GTP diphosphokinase CRSH, chloroplastic... 0.02 OrthoFinder output from all 47 species
Gb_25655 ATCRSH, CRSH Probable GTP diphosphokinase CRSH, chloroplastic... 0.03 OrthoFinder output from all 47 species
LOC_Os05g06890.1 ATCRSH, CRSH,... Probable GTP diphosphokinase CRSH1, chloroplastic... 0.04 OrthoFinder output from all 47 species
Lfl_g10366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430581g0010 ATCRSH, CRSH Probable GTP diphosphokinase CRSH, chloroplastic... 0.03 OrthoFinder output from all 47 species
Nbi_g10383 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g06700 ATCRSH, CRSH ppGpp synthetase *(CRSH) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g18830 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g50135 No alias ppGpp synthetase *(CRSH) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g14655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23137 ATCRSH, CRSH ppGpp synthetase *(CRSH) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e031121_P001 ATCRSH, CRSH,... Probable GTP diphosphokinase CRSH1, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007685 RelA_SpoT 511 635
IPR002048 EF_hand_dom 679 734
No external refs found!