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  5. Aob_g16805

Aob_g16805 (MEE32, EMB3004)


Aliases : MEE32, EMB3004

Description : 3-dehydroquinate dehydratase and shikimate dehydrogenase & original description: none


Gene families : OG0001444 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001444_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Aob_g16805
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Ala_g11559 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.02 OrthoFinder output from all 47 species
Ala_g28387 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.04 OrthoFinder output from all 47 species
Aop_g09413 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.04 OrthoFinder output from all 47 species
Dcu_g02805 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.04 OrthoFinder output from all 47 species
Dcu_g14948 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.04 OrthoFinder output from all 47 species
Dde_g10597 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.05 OrthoFinder output from all 47 species
Dde_g28775 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.02 OrthoFinder output from all 47 species
Solyc01g067750.3.1 MEE32, EMB3004,... 3-dehydroquinate dehydratase and shikimate dehydrogenase 0.03 OrthoFinder output from all 47 species
Spa_g21610 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.03 OrthoFinder output from all 47 species
Zm00001e017662_P001 MEE32, EMB3004,... 3-dehydroquinate dehydratase and shikimate dehydrogenase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001381 DHquinase_I 9 226
IPR013708 Shikimate_DH-bd_N 240 320
IPR041121 SDH_C 478 505
No external refs found!