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  5. Lfl_g22601

Lfl_g22601


Description : subgroup ERF-I transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g22601
Cluster HCCA: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00044590 DREB2A, DREB2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00051p00204250 DEAR2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
Als_g04224 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g14756 No alias subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22453 No alias subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28734 No alias subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33290 tny subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g36562 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Als_g36635 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.01 OrthoFinder output from all 47 species
Als_g51788 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Als_g58152 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g61751 RAP2.1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62202 No alias subgroup ERF-III transcription factor & original... 0.1 OrthoFinder output from all 47 species
Als_g62542 No alias subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22458 HRE2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22445 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g33790 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g07566 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005747001 DRN-LIKE, ESR2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
LOC_Os02g54050.1 LOC_Os02g54050 Ethylene-responsive transcription factor ERF018... 0.04 OrthoFinder output from all 47 species
LOC_Os03g08500.2 RAP2.2, LOC_Os03g08500 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g41760.1 ATERF12, ERF12,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Len_g01166 RAP2.9, DEAR5 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g14523 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Len_g41423 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Msp_g08809 CRF4 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g09157 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Msp_g09426 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g29252 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g43138 No alias subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011388 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Solyc04g080910.1.1 Solyc04g080910 transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
Solyc05g051200.1.1 ERF1, ATERF1,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc08g008305.1.1 Solyc08g008305 transcription factor (DREB) 0.08 OrthoFinder output from all 47 species
Solyc08g078170.1.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc09g075420.3.1 HRE2, Solyc09g075420 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Spa_g55358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003800_P001 RRTF1, Zm00001e003800 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Zm00001e006753_P003 RAP2.9, DEAR5,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e007205_P001 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1E... 0.01 OrthoFinder output from all 47 species
Zm00001e007352_P001 ERF-1, ATERF-1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e009947_P001 RRTF1, Zm00001e009947 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Zm00001e010195_P001 DREB1A, ATCBF3,... Dehydration-responsive element-binding protein 1A... 0.02 OrthoFinder output from all 47 species
Zm00001e015430_P001 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1G... 0.01 OrthoFinder output from all 47 species
Zm00001e019567_P001 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e021579_P001 ERF7, ATERF7,... Pathogenesis-related genes transcriptional activator... 0.01 OrthoFinder output from all 47 species
Zm00001e026989_P001 ERF110, Zm00001e026989 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e027351_P001 ATERF4, RAP2.5,... transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Zm00001e031783_P001 ERF110, Zm00001e031783 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Zm00001e032033_P001 ATERF-9, ERF9,... transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Zm00001e041620_P002 ATERF3, ERF3,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 165 214
No external refs found!