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  5. Aob_g15316

Aob_g15316 (ATCLASP, CLASP)


Aliases : ATCLASP, CLASP

Description : microtubule orientation regulator *(CLASP) & original description: none


Gene families : OG0001377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001377_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g15316
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00148640 ATCLASP, CLASP,... Cell cycle.cytokinesis.preprophase microtubule... 0.04 OrthoFinder output from all 47 species
AT2G20190 ATCLASP, CLASP CLIP-associated protein 0.02 OrthoFinder output from all 47 species
Adi_g024485 ATCLASP, CLASP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086375 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.03 OrthoFinder output from all 47 species
Adi_g103012 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
Adi_g105480 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.03 OrthoFinder output from all 47 species
Adi_g119357 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g21161 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
Als_g32923 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene00539.t1 ATCLASP, CLASP,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00540.t1 ATCLASP, CLASP,... microtubule orientation regulator *(CLASP) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene03826.t1 ATCLASP, CLASP,... microtubule orientation regulator *(CLASP) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0056.g034063 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000144.157 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g08319 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g26939 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01028493001 ATCLASP, CLASP Cell cycle.cytokinesis.preprophase microtubule... 0.03 OrthoFinder output from all 47 species
Gb_32967 ATCLASP, CLASP microtubule orientation regulator (CLASP) 0.03 OrthoFinder output from all 47 species
Len_g12938 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.04 OrthoFinder output from all 47 species
Mp4g01070.1 ATCLASP, CLASP microtubule orientation regulator (CLASP) 0.02 OrthoFinder output from all 47 species
Solyc09g063030.4.1 ATCLASP, CLASP,... microtubule orientation regulator (CLASP) 0.03 OrthoFinder output from all 47 species
Spa_g26122 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e007629_P001 ATCLASP, CLASP,... microtubule orientation regulator (CLASP) 0.03 OrthoFinder output from all 47 species
Zm00001e041199_P003 ATCLASP, CLASP,... microtubule orientation regulator (CLASP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017069 snRNA binding IEP HCCA
MF GO:0017070 U6 snRNA binding IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR024395 CLASP_N_dom 58 201
IPR024395 CLASP_N_dom 826 1013
IPR024395 CLASP_N_dom 289 504
No external refs found!