Aob_g15153 (CLPB3, CLPB-P, APG6)

Aliases : CLPB3, CLPB-P, APG6

Description : organellar chaperone *(Clp-p/Clp-m) & original description: none

Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g15153
Cluster	HCCA: Cluster_153

Target	Alias	Description	ECC score	Gene Family Method
Adi_g001206	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g010878	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g01489	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g38166	SAG15, CLPD, ERD1	chaperone component *(ClpD) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Als_g38181	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g49540	CLPB3, CLPB-P, APG6	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g12962	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene10809.t1	SAG15, CLPD,...	chaperone component *(ClpD) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Aspi01Gene55979.t1	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Cba_g04072	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
Cba_g20352	HSP93-V, DCA1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cre02.g090850	CLPB3, CLPB-P, APG6	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
Dac_g01014	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g25408	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
GSVIVT01007880001	ATHSP101, HOT1, HSP101	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
GSVIVT01011496001	CLPB3, CLPB-P, APG6	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
LOC_Os02g08490.1	CLPB4, CLPB-M,...	organellar chaperone (Clp-p\|Clp-m)	0.02	OrthoFinder output from all 47 species
LOC_Os02g32520.1	SAG15, CLPD,...	chaperone component ClpD of chloroplast Clp-type protease complex	0.03	OrthoFinder output from all 47 species
LOC_Os03g31300.1	CLPB3, CLPB-P,...	organellar chaperone (Clp-p\|Clp-m)	0.02	OrthoFinder output from all 47 species
LOC_Os05g44340.1	ATHSP101, HOT1,...	cytosolic chaperone (Hsp101)	0.03	OrthoFinder output from all 47 species
Len_g02921	SAG15, CLPD, ERD1	chaperone component *(ClpD) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Len_g34142	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Lfl_g23098	HSP93-V, DCA1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_178786g0010	CLPB3, CLPB-P, APG6	Chaperone protein ClpB2, chloroplastic OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
MA_763g0010	CLPB4, CLPB-M, HSP98.7	organellar chaperone (Clp-p\|Clp-m)	0.02	OrthoFinder output from all 47 species
Mp5g14810.1	SAG15, CLPD, ERD1	chaperone component ClpD of chloroplast Clp-type protease complex	0.02	OrthoFinder output from all 47 species
Pir_g09778	SAG15, CLPD, ERD1	chaperone component *(ClpD) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
Pp3c19_4790V3.1	ATHSP101, HOT1,...	heat shock protein 101	0.01	OrthoFinder output from all 47 species
Ppi_g10767	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g33706	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g43633	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009060	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original...	0.02	OrthoFinder output from all 47 species
Smo170696	ATHSP101, HOT1, HSP101	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
Smo174539	CLPB3, CLPB-P, APG6	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
Smo411118	CLPB3, CLPB-P, APG6	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
Solyc02g088610.4.1	CLPB3, CLPB-P,...	organellar chaperone (Clp-p\|Clp-m)	0.03	OrthoFinder output from all 47 species
Solyc03g117950.3.1	SAG15, CLPD,...	chaperone component ClpD of chloroplast Clp-type protease complex	0.03	OrthoFinder output from all 47 species
Solyc06g011370.4.1	CLPB4, CLPB-M,...	Chaperone protein ClpB3, mitochondrial OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
Solyc06g011380.2.1	CLPB4, CLPB-M,...	Chaperone protein ClpB4, mitochondrial OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc06g011400.2.1	CLPB4, CLPB-M,...	Chaperone protein ClpB4, mitochondrial OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Spa_g17937	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g18896	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g03515	HSP93-V, DCA1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g04164	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e002026_P002	CLPB3, CLPB-P,...	organellar chaperone (Clp-p\|Clp-m)	0.03	OrthoFinder output from all 47 species
Zm00001e032223_P001	ATHSP101, HOT1,...	cytosolic chaperone (Hsp101)	0.02	OrthoFinder output from all 47 species
Zm00001e038056_P001	CLPB3, CLPB-P,...	organellar chaperone (Clp-p\|Clp-m)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000105	histidine biosynthetic process	IEP	HCCA
MF	GO:0000287	magnesium ion binding	IEP	HCCA
BP	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation	IEP	HCCA
MF	GO:0003879	ATP phosphoribosyltransferase activity	IEP	HCCA
MF	GO:0003972	RNA ligase (ATP) activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006547	histidine metabolic process	IEP	HCCA
BP	GO:0006914	autophagy	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
MF	GO:0008452	RNA ligase activity	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
MF	GO:0016763	pentosyltransferase activity	IEP	HCCA
MF	GO:0016886	ligase activity, forming phosphoric ester bonds	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0061919	process utilizing autophagic mechanism	IEP	HCCA
MF	GO:2001070	starch binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041546	ClpA/ClpB_AAA_lid	434	536
IPR004176	Clp_R_dom	110	160
IPR004176	Clp_R_dom	186	237
IPR003959	ATPase_AAA_core	296	408
IPR003959	ATPase_AAA_core	692	861
IPR019489	Clp_ATPase_C	868	946

External Links

No external refs found!

Aob_g15153 (CLPB3, CLPB-P, APG6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation