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Aliases : LDL3
Description : histone demethylase *(KDM1d) & original description: none
Gene families : OG0003426 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003426_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00182p00016710 | LDL3,... | Chromatin organisation.histone modifications.histone... | 0.06 | OrthoFinder output from all 47 species | |
| AT4G16310 | LDL3 | LSD1-like 3 | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g011994 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g06185 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g05833 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g11027 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g22303 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene66928.t1 | LDL3, Aspi01Gene66928 | histone demethylase *(KDM1d) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0054.g033788 | LDL3 | histone demethylase *(KDM1d) & original description: CDS=1-6162 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g14216 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.04G013700.1 | LDL3, Ceric.04G013700 | histone demethylase *(KDM1d) & original description:... | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.12G094400.1 | LDL3, Ceric.12G094400 | histone demethylase *(KDM1d) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g10965 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Dcu_g10966 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g23597 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009833001 | LDL3 | Lysine-specific histone demethylase 1 homolog 3... | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01009834001 | LDL3 | Lysine-specific histone demethylase 1 homolog 3... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_40614 | LDL3 | lysine-specific demethylase (LDL3) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g38850.1 | LDL3, LOC_Os10g38850 | lysine-specific demethylase (LDL3) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18074 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g04294 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| MA_120420g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_120420g0020 | LDL3 | lysine-specific demethylase (LDL3) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g14381 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g38960 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g40775 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g28867 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g11421 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g15135 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g02424 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g36106 | No alias | histone demethylase *(KDM1d) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo405878 | LDL3 | Chromatin organisation.histone modifications.histone... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g081100.3.1 | LDL3, Solyc04g081100 | lysine-specific demethylase (LDL3) | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g10310 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g26760 | LDL3 | histone demethylase *(KDM1d) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e002184_P001 | LDL3, Zm00001e002184 | lysine-specific demethylase (LDL3) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016491 | oxidoreductase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006479 | protein methylation | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| BP | GO:0008213 | protein alkylation | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016571 | histone methylation | IEP | HCCA |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | HCCA |
| MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0034968 | histone lysine methylation | IEP | HCCA |
| MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| No external refs found! |