Aob_g12812

Description : not classified & original description: none

Gene families : OG0002241 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002241_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g12812

Target	Alias	Description	ECC score	Gene Family Method
Adi_g006702	No alias	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Aev_g28778	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g09823	No alias	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Als_g23569	No alias	not classified & original description: none	0.1	OrthoFinder output from all 47 species
Aop_g13308	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Azfi_s0112.g045786	No alias	not classified & original description: CDS=152-2350	0.04	OrthoFinder output from all 47 species
Cba_g21532	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.34G006900.1	Ceric.34G006900	not classified & original description: pacid=50624161...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020614.28	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.01	OrthoFinder output from all 47 species
Dac_g14982	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g02920	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Dde_g16519	No alias	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Ehy_g02805	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01033307001	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.03	OrthoFinder output from all 47 species
Gb_15061	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.03	OrthoFinder output from all 47 species
Len_g30438	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g02041	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
MA_10426278g0010	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.03	OrthoFinder output from all 47 species
MA_138810g0010	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.09	OrthoFinder output from all 47 species
Mp2g02820.1	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.03	OrthoFinder output from all 47 species
Msp_g25907	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Nbi_g02219	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g08358	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g28212	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Pir_g19686	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g03149	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g14425	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo145812	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.02	OrthoFinder output from all 47 species
Solyc03g058190.3.1	Solyc03g058190	Putative elongation factor TypA-like SVR3, chloroplastic...	0.04	OrthoFinder output from all 47 species
Spa_g07228	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g02062	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g14485	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e014138_P001	Zm00001e014138	Putative elongation factor TypA-like SVR3, chloroplastic...	0.1	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005244	voltage-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0005247	voltage-gated chloride channel activity	IEP	HCCA
MF	GO:0005253	monoatomic anion channel activity	IEP	HCCA
MF	GO:0005254	chloride channel activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006298	mismatch repair	IEP	HCCA
BP	GO:0006801	superoxide metabolic process	IEP	HCCA
BP	GO:0006820	monoatomic anion transport	IEP	HCCA
BP	GO:0006821	chloride transport	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
MF	GO:0008308	voltage-gated monoatomic anion channel activity	IEP	HCCA
MF	GO:0008509	monoatomic anion transmembrane transporter activity	IEP	HCCA
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	HCCA
MF	GO:0015108	chloride transmembrane transporter activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022832	voltage-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0030983	mismatched DNA binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0072593	reactive oxygen species metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000640	EFG_V-like	482	566
IPR000795	T_Tr_GTP-bd_dom	89	280
IPR004161	EFTu-like_2	304	374

External Links

No external refs found!

Aob_g12812

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation