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  5. Aob_g12331

Aob_g12331


Description : not classified & original description: none


Gene families : OG0001264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g12331

Target Alias Description ECC score Gene Family Method Actions
Als_g24124 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g25729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34200.t1 Aspi01Gene34200 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene50169.t2 Aspi01Gene50169 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g17727 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02820 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g04311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0150.g023312 No alias not classified & original description: CDS=1-2631 0.03 OrthoFinder output from all 47 species
Sam_g07976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09598 No alias PIP/PIPL precursor polypeptide & original description: none 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 281 331
IPR002885 Pentatricopeptide_repeat 355 401
IPR002885 Pentatricopeptide_repeat 597 645
IPR002885 Pentatricopeptide_repeat 147 167
IPR002885 Pentatricopeptide_repeat 250 278
IPR002885 Pentatricopeptide_repeat 427 453
IPR002885 Pentatricopeptide_repeat 464 486
IPR002885 Pentatricopeptide_repeat 709 732
IPR002885 Pentatricopeptide_repeat 573 594
IPR002885 Pentatricopeptide_repeat 743 768
No external refs found!