1. Home
  2. Species
  3. Abrodictyum obscurum
  4. Sequence
  5. Aob_g12283

Aob_g12283


Description : not classified & original description: none


Gene families : OG0008510 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008510_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g12283

Target Alias Description ECC score Gene Family Method Actions
Adi_g059382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31736 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12576 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g33314 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27072 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g31217 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016151 nickel cation binding IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 416 445
IPR002885 Pentatricopeptide_repeat 277 306
IPR002885 Pentatricopeptide_repeat 528 559
IPR002885 Pentatricopeptide_repeat 374 406
No external refs found!