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  5. Aob_g12174

Aob_g12174 (RH8, ATRH8)


Aliases : RH8, ATRH8

Description : DDX6-type mRNA helicase *(RH12/RH8) & original description: none


Gene families : OG0001822 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001822_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g12174

Target Alias Description ECC score Gene Family Method Actions
AT3G61240 No alias DEA(D/H)-box RNA helicase family protein 0.02 OrthoFinder output from all 47 species
Aop_g02137 RH8, ATRH8 DDX6-type mRNA helicase *(RH12/RH8) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G064200.1 RH8, ATRH8,... DDX6-type mRNA helicase *(RH12/RH8) & original... 0.02 OrthoFinder output from all 47 species
Dac_g00777 RH8, ATRH8 DDX6-type mRNA helicase *(RH12/RH8) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08850 RH8, ATRH8 DDX6-type mRNA helicase *(RH12/RH8) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02256 RH8, ATRH8 DDX6-type mRNA helicase *(RH12/RH8) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026866001 RH8, ATRH8 DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Pir_g00579 RH8, ATRH8 DDX6-type mRNA helicase *(RH12/RH8) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c11_17170V3.1 RH8, ATRH8, Pp3c11_17170 RNAhelicase-like 8 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP HCCA
BP GO:0050684 regulation of mRNA processing IEP HCCA
BP GO:0080009 mRNA methylation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 305 411
IPR011545 DEAD/DEAH_box_helicase_dom 104 267
No external refs found!