Aob_g11840

Description : not classified & original description: none

Gene families : OG0003235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003235_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g11840

Target	Alias	Description	ECC score	Gene Family Method
AT1G74350	No alias	Intron maturase, type II family protein	0.02	OrthoFinder output from all 47 species
AT5G04050	No alias	RNA-directed DNA polymerase (reverse transcriptase)	0.03	OrthoFinder output from all 47 species
Ala_g21171	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os06g44880.1	LOC_Os06g44880	nMAT3/4 type-II mitochondrial RNA splicing factor	0.04	OrthoFinder output from all 47 species
Msp_g27190	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g40621	No alias	nMAT3/4 type-II mitochondrial RNA splicing factor &...	0.03	OrthoFinder output from all 47 species
Pir_g04350	MATR	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Sam_g28426	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc09g010285.1.1	Solyc09g010285	nMAT3/4 type-II mitochondrial RNA splicing factor	0.04	OrthoFinder output from all 47 species
Zm00001e037523_P001	Zm00001e037523	nMAT3/4 type-II mitochondrial RNA splicing factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR024937	Domain_X	117	258

External Links

No external refs found!