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  5. Aob_g11714

Aob_g11714


Description : not classified & original description: none


Gene families : OG0000712 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000712_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g11714

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00072820 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G07660 No alias Kinase-related protein of unknown function (DUF1296) 0.03 OrthoFinder output from all 47 species
Adi_g053981 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g061004 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g087204 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g129392 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02771 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g26624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04421.t1 Aspi01Gene04421 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12159.t1 Aspi01Gene12159 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g60344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G033400.1 Ceric.02G033400 not classified & original description: pacid=50584302... 0.07 OrthoFinder output from all 47 species
Ceric.29G083800.1 Ceric.29G083800 not classified & original description: pacid=50624429... 0.05 OrthoFinder output from all 47 species
Dac_g07091 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g09171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04008 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15721 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22243 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01014730001 No alias GBF-interacting protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01021389001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01030121001 No alias GBF-interacting protein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_30926 No alias GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os09g08670.1 LOC_Os09g08670 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g15622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_137710g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Ore_g17436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33233 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c25_6210V3.1 Pp3c25_6210 cleavage stimulating factor 64 0.02 OrthoFinder output from all 47 species
Ppi_g04679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0181.g024848 No alias not classified & original description: CDS=93-2615 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0233.g026486 No alias not classified & original description: CDS=154-2919 0.05 OrthoFinder output from all 47 species
Sam_g13683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g071180.3.1 Solyc02g071180 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc03g005750.3.1 Solyc03g005750 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g045230.4.1 Solyc07g045230 GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g46247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02140 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14041 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e026550_P001 Zm00001e026550 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e028004_P001 Zm00001e028004 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR009719 GIP1_N 17 76
No external refs found!