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  5. Aob_g11454

Aob_g11454 (GDAP1, GC3)


Aliases : GDAP1, GC3

Description : Golgin-type membrane tethering protein *(GC3/GC4) & original description: none


Gene families : OG0004731 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004731_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g11454

Target Alias Description ECC score Gene Family Method Actions
AT2G46180 GC4 golgin candidate 4 0.02 OrthoFinder output from all 47 species
Adi_g012373 GDAP1, GC3 Golgin-type membrane tethering protein *(GC3/GC4) &... 0.02 OrthoFinder output from all 47 species
Ala_g09723 GDAP1, GC3 Golgin-type membrane tethering protein *(GC3/GC4) &... 0.05 OrthoFinder output from all 47 species
Als_g03843 GDAP1, GC3 Golgin-type membrane tethering protein *(GC3/GC4) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0141.g051342 GC4 Golgin-type membrane tethering protein *(GC3/GC4) &... 0.02 OrthoFinder output from all 47 species
Ceric.25G063900.1 GDAP1, GC3,... Golgin-type membrane tethering protein *(GC3/GC4) &... 0.03 OrthoFinder output from all 47 species
Cre12.g495800 GC4 Vesicle trafficking.target membrane tethering.Golgi... 0.02 OrthoFinder output from all 47 species
Dde_g02316 GDAP1, GC3 Golgin-type membrane tethering protein *(GC3/GC4) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01027009001 GDAP1, GC3 Vesicle trafficking.target membrane tethering.Golgi... 0.03 OrthoFinder output from all 47 species
Gb_09656 GC4 golgin (GC3|GC4) 0.03 OrthoFinder output from all 47 species
Lfl_g09469 GDAP1, GC3 Golgin-type membrane tethering protein *(GC3/GC4) &... 0.05 OrthoFinder output from all 47 species
Mp6g07280.1 GDAP1, GC3 golgin (GC3|GC4) 0.06 OrthoFinder output from all 47 species
Nbi_g01276 GDAP1, GC3 Golgin-type membrane tethering protein *(GC3/GC4) &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016940 GDAP1, GC3 Golgin-type membrane tethering protein *(GC3/GC4) &... 0.03 OrthoFinder output from all 47 species
Tin_g06109 GDAP1, GC3 Golgin-type membrane tethering protein *(GC3/GC4) &... 0.03 OrthoFinder output from all 47 species
Zm00001e004187_P001 GC4, Zm00001e004187 golgin (GC3|GC4) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
CC GO:0000145 exocyst IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:0140352 export from cell IEP HCCA

No InterPro domains available for this sequence

No external refs found!