Aob_g11443 (ATHB1, ATHB-1, HAT5,...)

Aliases : ATHB1, ATHB-1, HAT5, HD-ZIP-1, HB-1

Description : HD-ZIP I/II-type transcription factor & original description: none

Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g11443

Target	Alias	Description	ECC score	Gene Family Method
AT5G53980	ATHB52, HB52	homeobox protein 52	0.02	OrthoFinder output from all 47 species
Gb_39722	ATHB13	transcription factor (HD-ZIP I/II)	0.05	OrthoFinder output from all 47 species
Lfl_g08245	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
Pir_g24965	HB6, ATHB6	HD-ZIP I/II-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018854	HB6, ATHB6	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Solyc02g077590.1.1	ATHB52, HB52,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Solyc05g051460.3.1	ATHB16, HB16,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Solyc07g062790.1.1	ATHB52, HB52,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Zm00001e007381_P001	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Zm00001e009770_P001	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004126	cytidine deaminase activity	IEP	HCCA
BP	GO:0006213	pyrimidine nucleoside metabolic process	IEP	HCCA
BP	GO:0006216	cytidine catabolic process	IEP	HCCA
BP	GO:0008037	cell recognition	IEP	HCCA
BP	GO:0009116	nucleoside metabolic process	IEP	HCCA
BP	GO:0009119	ribonucleoside metabolic process	IEP	HCCA
BP	GO:0009164	nucleoside catabolic process	IEP	HCCA
BP	GO:0009972	cytidine deamination	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	HCCA
MF	GO:0019239	deaminase activity	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	HCCA
BP	GO:0034656	nucleobase-containing small molecule catabolic process	IEP	HCCA
BP	GO:0042454	ribonucleoside catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
BP	GO:0044282	small molecule catabolic process	IEP	HCCA
BP	GO:0046087	cytidine metabolic process	IEP	HCCA
BP	GO:0046131	pyrimidine ribonucleoside metabolic process	IEP	HCCA
BP	GO:0046133	pyrimidine ribonucleoside catabolic process	IEP	HCCA
BP	GO:0046135	pyrimidine nucleoside catabolic process	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
BP	GO:0048544	recognition of pollen	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	HCCA
BP	GO:0072529	pyrimidine-containing compound catabolic process	IEP	HCCA
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA
BP	GO:1901657	glycosyl compound metabolic process	IEP	HCCA
BP	GO:1901658	glycosyl compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	81	135
IPR003106	Leu_zip_homeo	136	171

External Links

No external refs found!

Aob_g11443 (ATHB1, ATHB-1, HAT5,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation