Aob_g10962


Description : not classified & original description: none


Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g10962

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00075p00162770 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT4G14920 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.02 OrthoFinder output from all 47 species
AT5G36740 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 OrthoFinder output from all 47 species
Adi_g001198 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13062 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23026 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre08.g386000 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g09002 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16965 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g01772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07958 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_10088 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.03 OrthoFinder output from all 47 species
Gb_10246 No alias PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os03g53630.1 LOC_Os03g53630 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os04g35430.1 LOC_Os04g35430 component IDM1 of ROS1-recruitment complex. PHD finger... 0.02 OrthoFinder output from all 47 species
LOC_Os07g07690.1 LOC_Os07g07690 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Len_g12071 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g17560 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp6g21090.2 No alias PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Nbi_g07082 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18818 No alias component *(IDM1) of ROS1-recruitment complex & original... 0.02 OrthoFinder output from all 47 species
Ppi_g08484 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g005170.3.1 Solyc03g005170 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc03g071550.3.1 Solyc03g071550 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc06g082040.2.1 Solyc06g082040 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g031580.3.1 Solyc09g031580 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e012046_P003 Zm00001e012046 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR008395 Agenet-like_dom 18 101
IPR019787 Znf_PHD-finger 898 939
IPR032308 TDBD 826 877
No external refs found!