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  5. Aob_g10600

Aob_g10600


Description : component *(Sec24) of Sec23/24 cargo adaptor subcomplex & original description: none


Gene families : OG0003525 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003525_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g10600
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00084390 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 OrthoFinder output from all 47 species
AT3G44340 CEF clone eighty-four 0.03 OrthoFinder output from all 47 species
AT4G32640 No alias Sec23/Sec24 protein transport family protein 0.03 OrthoFinder output from all 47 species
Adi_g059790 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.06 OrthoFinder output from all 47 species
Aev_g01583 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
Ala_g05132 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.05 OrthoFinder output from all 47 species
Als_g15380 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Aspi01Gene00682.t1 CEF, Aspi01Gene00682 component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.05 OrthoFinder output from all 47 species
Azfi_s0310.g064143 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Ceric.16G039000.1 Ceric.16G039000 component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000829.3 CEF Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 OrthoFinder output from all 47 species
Dcu_g06456 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.06 OrthoFinder output from all 47 species
Dcu_g06486 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.07 OrthoFinder output from all 47 species
Ehy_g09715 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014611001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.08 OrthoFinder output from all 47 species
Gb_38621 CEF component Sec24 of Sec23/24 cargo adaptor subcomplex 0.08 OrthoFinder output from all 47 species
LOC_Os12g24250.1 CEF, LOC_Os12g24250 component Sec24 of Sec23/24 cargo adaptor subcomplex 0.02 OrthoFinder output from all 47 species
Len_g03398 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Lfl_g26302 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.06 OrthoFinder output from all 47 species
MA_45050g0010 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.03 OrthoFinder output from all 47 species
MA_923164g0010 CEF component Sec24 of Sec23/24 cargo adaptor subcomplex 0.05 OrthoFinder output from all 47 species
Mp7g13350.1 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.02 OrthoFinder output from all 47 species
Msp_g25229 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.05 OrthoFinder output from all 47 species
Nbi_g12383 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Pir_g11399 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.05 OrthoFinder output from all 47 species
Ppi_g06491 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011262 CEF component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Smo140536 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 OrthoFinder output from all 47 species
Solyc06g084210.3.1 CEF, Solyc06g084210 component Sec24 of Sec23/24 cargo adaptor subcomplex 0.02 OrthoFinder output from all 47 species
Spa_g52344 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Zm00001e021459_P002 CEF, Zm00001e021459 component Sec24 of Sec23/24 cargo adaptor subcomplex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006895 Znf_Sec23_Sec24 420 458
IPR006896 Sec23/24_trunk_dom 495 734
IPR007123 Gelsolin-like_dom 961 1028
IPR012990 Sec23_24_beta_S 740 823
IPR006900 Sec23/24_helical_dom 835 935
No external refs found!