Aob_g09733 (HIS1-3)


Aliases : HIS1-3

Description : linker histone *(H1) & original description: none


Gene families : OG0000310 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000310_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g09733
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Als_g03555 HIS1-3 linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09382 HIS1-3 linker histone *(H1) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g10118 No alias linker histone *(H1) & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.34G011100.1 HIS1-3, Ceric.34G011100 linker histone *(H1) & original description:... 0.06 OrthoFinder output from all 47 species
Lfl_g30136 No alias linker histone *(H1) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g066100.3.1 Solyc09g066100 linker histone (H1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR005818 Histone_H1/H5_H15 43 110
No external refs found!