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  5. Aob_g09607

Aob_g09607 (YCF32, PSBY)


Aliases : YCF32, PSBY

Description : component *(PsbY) of PS-II complex & original description: none


Gene families : OG0003004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003004_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g09607

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00157390 YCF32, PSBY,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.06 OrthoFinder output from all 47 species
AT1G67740 YCF32, PSBY photosystem II BY 0.06 OrthoFinder output from all 47 species
Adi_g054387 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g15204 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Als_g00686 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g15370 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07588.t1 YCF32, PSBY,... component *(PsbY) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.33G057000.1 YCF32, PSBY,... component *(PsbY) of PS-II complex & original... 0.05 OrthoFinder output from all 47 species
Cre10.g452100 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.08 OrthoFinder output from all 47 species
Dac_g11818 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g51618 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g25972 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g00811 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Gb_22296 YCF32, PSBY component PsbY of PS-II complex 0.06 OrthoFinder output from all 47 species
LOC_Os08g02630.1 YCF32, PSBY,... component PsbY of PS-II complex 0.07 OrthoFinder output from all 47 species
Len_g16274 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Len_g41372 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
MA_12201g0010 YCF32, PSBY component PsbY of PS-II complex 0.04 OrthoFinder output from all 47 species
Mp8g12730.1 YCF32, PSBY component PsbY of PS-II complex 0.07 OrthoFinder output from all 47 species
Msp_g06438 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g12997 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00552 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27683 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00365 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31046 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c8_24120V3.1 YCF32, PSBY, Pp3c8_24120 photosystem II BY 0.02 OrthoFinder output from all 47 species
Ppi_g00114 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g20798 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g40546 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018725 YCF32, PSBY component *(PsbY) of PS-II complex & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0116.g021073 YCF32, PSBY component *(PsbY) of PS-II complex & original... 0.03 OrthoFinder output from all 47 species
Sam_g28840 No alias component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0030145 manganese ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR009388 PSII_PsbY 80 110
IPR009388 PSII_PsbY 149 181
IPR009388 PSII_PsbY 220 252
No external refs found!