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  5. Aob_g09305

Aob_g09305 (VPS37-1)


Aliases : VPS37-1

Description : component *(VPS37) of ESCRT-I complex & original description: none


Gene families : OG0002321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002321_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g09305
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
Aev_g48400 VPS37-1 component *(VPS37) of ESCRT-I complex & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene33469.t1 VPS37-1, Aspi01Gene33469 component *(VPS37) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Dcu_g02487 VPS37-1 component *(VPS37) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Dde_g34374 VPS37-1 component *(VPS37) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
LOC_Os03g08770.1 VPS37-1, LOC_Os03g08770 component VPS37 of ESCRT-I complex 0.03 OrthoFinder output from all 47 species
Mp4g14010.1 No alias component VPS37 of ESCRT-I complex 0.03 OrthoFinder output from all 47 species
Nbi_g19985 VPS37-1 component *(VPS37) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Solyc10g083780.1.1 VPS37-1, Solyc10g083780 component VPS37 of ESCRT-I complex 0.02 OrthoFinder output from all 47 species
Spa_g20595 No alias component *(VPS37) of ESCRT-I complex & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR009851 Mod_r 89 231
No external refs found!