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  5. Aob_g09047

Aob_g09047


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g09047
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00147950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.02 OrthoFinder output from all 47 species
Aev_g08051 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18257 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Als_g50192 No alias Trihelix-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Als_g57836 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g59070 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12926 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71848.t1 Aspi01Gene71848 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0531.g075823 AT-GT2, GT2 Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g72625 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.35G006300.1 Ceric.35G006300 Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g39560 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g24833 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026588001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.02 OrthoFinder output from all 47 species
LOC_Os04g45750.1 LOC_Os04g45750 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
MA_79619g0010 No alias transcription factor (Trihelix) 0.06 OrthoFinder output from all 47 species
Msp_g06014 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35869 No alias Trihelix-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g47167 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08779 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36845 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59710 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65125 No alias Trihelix-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018240 AT-GT2, GT2 Trihelix-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023173 No alias Trihelix-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Smo85122 No alias Trihelix transcription factor GT-2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Tin_g31947 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 186 272
IPR044822 Myb_DNA-bind_4 496 580
No external refs found!