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  5. Aob_g08936

Aob_g08936 (AtTLP3, TLP3)


Aliases : AtTLP3, TLP3

Description : TUB-type transcription factor & original description: none


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g08936

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00040910 TLP10, AtTLP10,... RNA biosynthesis.transcriptional activation.TUB... 0.03 OrthoFinder output from all 47 species
AT1G61940 AtTLP4, TLP4 tubby like protein 4 0.02 OrthoFinder output from all 47 species
AT2G47900 AtTLP3, TLP3 tubby like protein 3 0.02 OrthoFinder output from all 47 species
Adi_g115192 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene47134.t1 AtTLP3, TLP3,... TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06248 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19890 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08281 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g36190.1 TLP10, AtTLP10,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
MA_10430830g0020 TLP10, AtTLP10 transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Ppi_g18593 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g104670.3.1 TLP10, AtTLP10,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Zm00001e023326_P001 TLP2, AtTLP2,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 57 104
IPR000007 Tubby_C 118 411
No external refs found!