1. Home
  2. Species
  3. Abrodictyum obscurum
  4. Sequence
  5. Aob_g08476

Aob_g08476 (STI)


Aliases : STI

Description : not classified & original description: none


Gene families : OG0000214 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000214_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g08476
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00169350 evm_27.TU.AmTr_v1... Protein STICHEL-like 2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Adi_g003362 STI not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g013440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g112831 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12565 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25786 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26223 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g61956 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33497 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01300.t1 STI, Aspi01Gene01300 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19861.t2 STI, Aspi01Gene19861 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28236.t1 Aspi01Gene28236 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35944.t2 STI, Aspi01Gene35944 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48229.t1 STI, Aspi01Gene48229 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0019.g015008 STI not classified & original description: CDS=518-3727 0.03 OrthoFinder output from all 47 species
Azfi_s0037.g025896 No alias not classified & original description: CDS=287-3238 0.03 OrthoFinder output from all 47 species
Ceric.09G075500.1 STI, Ceric.09G075500 not classified & original description: pacid=50588395... 0.04 OrthoFinder output from all 47 species
Ceric.24G026300.1 STI, Ceric.24G026300 not classified & original description: pacid=50628530... 0.03 OrthoFinder output from all 47 species
Ceric.27G034600.1 STI, Ceric.27G034600 not classified & original description: pacid=50605520... 0.04 OrthoFinder output from all 47 species
Ceric.32G062000.1 STI, Ceric.32G062000 not classified & original description: pacid=50597745... 0.03 OrthoFinder output from all 47 species
Ceric.36G004000.1 Ceric.36G004000 not classified & original description: pacid=50568113... 0.03 OrthoFinder output from all 47 species
Dac_g06474 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05768 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07167 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12024 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g19715 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02399 STI not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_06112 STI Protein STICHEL OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g53070.1 LOC_Os01g53070 Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g10670.1 STI, LOC_Os12g10670 Protein STICHEL OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g19180.1 LOC_Os12g19180 Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g14713 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19722 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g20046 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04258 STI not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g12306 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_49149g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g32095 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12151 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27279 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11847 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g58288 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59306 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59410 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11006 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29990 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005090 STI not classified & original description: CDS=631-4575 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010327 No alias not classified & original description: CDS=516-4208 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s3431.g028773 No alias not classified & original description: CDS=1-498 0.03 OrthoFinder output from all 47 species
Sam_g25287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g02988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18267 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01269 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13709 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003951 NAD+ kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR022754 DNA_pol_III_gamma-3 748 813
No external refs found!