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  5. Aob_g08425

Aob_g08425


Description : not classified & original description: none


Gene families : OG0001047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g08425

Target Alias Description ECC score Gene Family Method Actions
AT1G33680 No alias KH domain-containing protein 0.02 OrthoFinder output from all 47 species
AT2G25970 No alias KH domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g088534 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20615 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02435 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13995 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g29246 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32757 No alias virus infection resistance factor *(BTR1) & original... 0.02 OrthoFinder output from all 47 species
Aop_g12066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07206.t1 Aspi01Gene07206 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69176.t1 Aspi01Gene69176 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g72682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G027700.1 Ceric.03G027700 not classified & original description: pacid=50573278... 0.04 OrthoFinder output from all 47 species
Ceric.20G036400.1 Ceric.20G036400 not classified & original description: pacid=50567078... 0.04 OrthoFinder output from all 47 species
Dcu_g11627 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g11741 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g10230 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02873 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036378001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_04922 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_31122 No alias Protein BTR1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os08g01930.1 LOC_Os08g01930 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g24459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_13061g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g42189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26146 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g38566 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15963 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g18992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g19749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33967 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000424 No alias not classified & original description: CDS=117-1961 0.03 OrthoFinder output from all 47 species
Sam_g15729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g040370.2.1 Solyc11g040370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g07318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 118 183
IPR004088 KH_dom_type_1 214 282
No external refs found!