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  5. Lfl_g21843

Lfl_g21843 (FTSH1)


Aliases : FTSH1

Description : component *(FtsH1/2/5/6/8) of FtsH plastidial protease complexes & original description: none


Gene families : OG0005126 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005126_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g21843
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00232760 FTSH5, VAR1,... Protein degradation.peptidase families.metallopeptidase... 0.09 OrthoFinder output from all 47 species
AT1G50250 FTSH1 FTSH protease 1 0.08 OrthoFinder output from all 47 species
AT5G42270 FTSH5, VAR1 FtsH extracellular protease family 0.07 OrthoFinder output from all 47 species
Adi_g010069 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.08 OrthoFinder output from all 47 species
Aev_g18234 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.05 OrthoFinder output from all 47 species
Ala_g14669 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.08 OrthoFinder output from all 47 species
Als_g08677 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.05 OrthoFinder output from all 47 species
Als_g51773 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.05 OrthoFinder output from all 47 species
Aob_g06009 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.08 OrthoFinder output from all 47 species
Aob_g26986 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.06 OrthoFinder output from all 47 species
Aop_g03836 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.09 OrthoFinder output from all 47 species
Azfi_s0065.g035780 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Cba_g71747 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Ceric.14G083900.1 FTSH1, Ceric.14G083900 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.11 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.23 FTSH1 ATP-dependent zinc metalloprotease FTSH 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Cre12.g485800 FTSH1 Protein degradation.peptidase families.metallopeptidase... 0.02 OrthoFinder output from all 47 species
Dac_g08252 FTSH5, VAR1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.08 OrthoFinder output from all 47 species
Dcu_g12715 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.1 OrthoFinder output from all 47 species
Dde_g00875 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.09 OrthoFinder output from all 47 species
Ehy_g09917 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
GSVIVT01008686001 FTSH1 ATP-dependent zinc metalloprotease FTSH 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
LOC_Os06g51029.1 FTSH1, LOC_Os06g51029 component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.07 OrthoFinder output from all 47 species
Len_g16157 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.1 OrthoFinder output from all 47 species
Mp3g08790.1 FTSH1 component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.03 OrthoFinder output from all 47 species
Msp_g09054 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.09 OrthoFinder output from all 47 species
Nbi_g12160 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.09 OrthoFinder output from all 47 species
Ore_g05794 FTSH1 protease *(FtsH1/5) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g36173 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.09 OrthoFinder output from all 47 species
Pir_g11763 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.07 OrthoFinder output from all 47 species
Pnu_g06088 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Ppi_g16389 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.1 OrthoFinder output from all 47 species
Sacu_v1.1_s0154.g023581 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Sam_g09587 No alias component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.09 OrthoFinder output from all 47 species
Smo139726 FTSH1 Protein degradation.peptidase families.metallopeptidase... 0.06 OrthoFinder output from all 47 species
Solyc04g082250.3.1 FTSH5, VAR1,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.1 OrthoFinder output from all 47 species
Spa_g06354 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.08 OrthoFinder output from all 47 species
Tin_g09560 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Zm00001e030153_P001 FTSH1, Zm00001e030153 component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 451 492
IPR000642 Peptidase_M41 510 703
IPR003959 ATPase_AAA_core 297 428
No external refs found!