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  5. Aob_g07334

Aob_g07334


Description : component *(ASI1) of ASI1-AIPP1-EDM2 chromatin silencing regulator complex & original description: none


Gene families : OG0002301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002301_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g07334

Target Alias Description ECC score Gene Family Method Actions
Adi_g021709 No alias component *(ASI1) of ASI1-AIPP1-EDM2 chromatin silencing... 0.04 OrthoFinder output from all 47 species
Aev_g03279 No alias component *(ASI1) of ASI1-AIPP1-EDM2 chromatin silencing... 0.04 OrthoFinder output from all 47 species
Aop_g70597 No alias component *(ASI1) of ASI1-AIPP1-EDM2 chromatin silencing... 0.03 OrthoFinder output from all 47 species
Ceric.16G054700.1 Ceric.16G054700 component *(ASI1) of ASI1-AIPP1-EDM2 chromatin silencing... 0.05 OrthoFinder output from all 47 species
Ceric.1Z070700.1 Ceric.1Z070700 component *(ASI1) of ASI1-AIPP1-EDM2 chromatin silencing... 0.03 OrthoFinder output from all 47 species
Dac_g16211 No alias component *(ASI1) of ASI1-AIPP1-EDM2 chromatin silencing... 0.03 OrthoFinder output from all 47 species
Pir_g12190 No alias component *(ASI1) of ASI1-AIPP1-EDM2 chromatin silencing... 0.02 OrthoFinder output from all 47 species
Sam_g29064 No alias component *(ASI1) of ASI1-AIPP1-EDM2 chromatin silencing... 0.02 OrthoFinder output from all 47 species
Spa_g31086 No alias component *(ASI1) of ASI1-AIPP1-EDM2 chromatin silencing... 0.02 OrthoFinder output from all 47 species
Tin_g10317 No alias component *(ASI1) of ASI1-AIPP1-EDM2 chromaTin silencing... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001025 BAH_dom 36 157
IPR000504 RRM_dom 584 649
No external refs found!