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  5. Aob_g06718

Aob_g06718 (HSP93-V, DCA1,...)


Aliases : HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1

Description : chaperone component *(ClpC) of chloroplast Clp-type protease complex & original description: none


Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g06718
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00164160 HSP93-V, DCA1,... External stimuli response.temperature.Hsp... 0.06 OrthoFinder output from all 47 species
AMTR_s00110p00042430 CLPB3, CLPB-P,... External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from all 47 species
AT5G50920 HSP93-V, DCA1,... CLPC homologue 1 0.06 OrthoFinder output from all 47 species
Adi_g001206 ATHSP101, HOT1, HSP101 cytosolic chaperone *(Hsp101) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g010878 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g088541 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.07 OrthoFinder output from all 47 species
Aev_g05486 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Aev_g28850 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Ala_g11691 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.1 OrthoFinder output from all 47 species
Ala_g12182 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.07 OrthoFinder output from all 47 species
Als_g16086 HSP93-V, DCA1,... not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g08864 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Aop_g16852 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Cba_g20352 HSP93-V, DCA1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g33300 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G041000.1 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Ceric.07G005700.1 CLPB3, CLPB-P,... organellar chaperone *(Clp-p/Clp-m) & original... 0.03 OrthoFinder output from all 47 species
Ceric.15G073100.1 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.05 OrthoFinder output from all 47 species
Ceric.30G013400.1 SAG15, CLPD,... chaperone component *(ClpD) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000655.28 HSP93-V, DCA1,... External stimuli response.temperature.Hsp... 0.01 OrthoFinder output from all 47 species
Dcu_g08738 HSP93-V, DCA1,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g14360 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Dde_g24879 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Ehy_g21280 HSP93-V, DCA1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g32560.1 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.03 OrthoFinder output from all 47 species
Len_g14887 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Len_g29759 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Len_g34142 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Lfl_g02311 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07411 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
MA_1160713g0010 HSP93-V, DCA1,... ATP-dependent Clp protease ATP-binding subunit ClpA... 0.02 OrthoFinder output from all 47 species
MA_596288g0010 HSP93-V, DCA1,... Chaperone protein ClpC1, chloroplastic OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_8117g0010 HSP93-V, DCA1,... ATP-dependent Clp protease ATP-binding subunit ClpA... 0.02 OrthoFinder output from all 47 species
Mp1g02560.1 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.02 OrthoFinder output from all 47 species
Msp_g05637 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Nbi_g10414 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.05 OrthoFinder output from all 47 species
Ore_g13933 HSP93-V, DCA1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29985 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.05 OrthoFinder output from all 47 species
Pir_g11806 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Pnu_g23962 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009060 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009790 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Sam_g16601 No alias chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Sam_g16602 No alias chaperone component *(ClpC) of chloroplast Clp-type... 0.05 OrthoFinder output from all 47 species
Sam_g17391 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19448 No alias organellar chaperone *(Clp-p/Clp-m) & original description: none 0.04 OrthoFinder output from all 47 species
Smo439163 HSP93-V, DCA1,... External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from all 47 species
Solyc12g042060.3.1 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.06 OrthoFinder output from all 47 species
Spa_g19032 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Spa_g38742 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Spa_g46302 CLPB3, CLPB-P, APG6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g47608 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.05 OrthoFinder output from all 47 species
Tin_g10070 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Zm00001e008312_P001 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.02 OrthoFinder output from all 47 species
Zm00001e039805_P002 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.02 OrthoFinder output from all 47 species
Zm00001e040778_P001 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003951 NAD+ kinase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 640 815
IPR019489 Clp_ATPase_C 821 900
IPR004176 Clp_R_dom 188 239
IPR004176 Clp_R_dom 112 164
IPR003959 ATPase_AAA_core 303 432
IPR041546 ClpA/ClpB_AAA_lid 441 542
No external refs found!