Aob_g06699


Description : regulatory protein *(RCF3) of HYL1-phosphorylation & original description: none


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g06699

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00116200 evm_27.TU.AmTr_v1... KH domain-containing protein HEN4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G03110 No alias RNA binding;nucleic acid binding 0.03 OrthoFinder output from all 47 species
AT5G64390 HEN4 RNA-binding KH domain-containing protein 0.04 OrthoFinder output from all 47 species
Adi_g011502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055146 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g080529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g100933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07964 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Ala_g02047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08517 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09611 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Als_g16566 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.04 OrthoFinder output from all 47 species
Als_g25451 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04253 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene21711.t1 Aspi01Gene21711 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0021.g015733 No alias not classified & original description: CDS=260-2488 0.03 OrthoFinder output from all 47 species
Cba_g03276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07160 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07339 HEN4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g12024 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12254 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Cba_g17642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g71670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G014300.1 Ceric.01G014300 not classified & original description: pacid=50590557... 0.02 OrthoFinder output from all 47 species
Ceric.32G061200.1 Ceric.32G061200 not classified & original description: pacid=50597564... 0.03 OrthoFinder output from all 47 species
Dac_g09565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16071 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Dcu_g10791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12387 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12897 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g24061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10346 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07829 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009261001 No alias RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
GSVIVT01038571001 No alias RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
LOC_Os01g13470.1 LOC_Os01g13470 RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
LOC_Os10g35220.1 LOC_Os10g35220 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g07805 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30414 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429211g0010 No alias RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
MA_10433640g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_12604g0010 No alias RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Mp3g04880.1 No alias RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Msp_g10485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32267 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g06772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10012 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18548 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21139 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06476 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g12959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13999 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Pnu_g14000 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.06 OrthoFinder output from all 47 species
Pnu_g32788 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009457 No alias not classified & original description: CDS=528-2219 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015180 No alias E3 ubiquitin ligase *(STUBL1/3) & original description:... 0.02 OrthoFinder output from all 47 species
Sam_g08472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13844 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Sam_g15786 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo73985 No alias RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Solyc02g067210.3.1 Solyc02g067210 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc03g034200.3.1 Solyc03g034200 RNA-binding KH domain-containing protein RCF3... 0.04 OrthoFinder output from all 47 species
Solyc08g048500.3.1 Solyc08g048500 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g08106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22547 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e037033_P001 Zm00001e037033 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 55 107
IPR004088 KH_dom_type_1 445 507
IPR004088 KH_dom_type_1 195 263
IPR004088 KH_dom_type_1 620 683
IPR004088 KH_dom_type_1 361 410
No external refs found!