Aob_g06492 (SCN1)

Aliases : SCN1

Description : guanine nucleotide dissociation inhibitor *(RopGDI) & original description: none

Gene families : OG0001513 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001513_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g06492

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00067p00174290	SCN1,...	Multi-process regulation.Rop GTPase regulatory...	0.02	OrthoFinder output from all 47 species
Als_g00528	SCN1	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.03	OrthoFinder output from all 47 species
Dde_g51936	SCN1	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.02	OrthoFinder output from all 47 species
Ehy_g04328	SCN1	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.03	OrthoFinder output from all 47 species
Pir_g11177	SCN1	guanine nucleotide dissociation inhibitor *(RopGDI) &...	0.03	OrthoFinder output from all 47 species
Zm00001e015664_P002	SCN1, Zm00001e015664	guanine nucleotide dissociation inhibitor (RopGDI)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005092	GDP-dissociation inhibitor activity	None	Extended
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007264	small GTPase mediated signal transduction	None	Extended
BP	GO:0007265	Ras protein signal transduction	None	Extended
BP	GO:0007266	Rho protein signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030695	GTPase regulator activity	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140677	molecular function activator activity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
CC	GO:0008303	caspase complex	IEP	HCCA
BP	GO:0016255	attachment of GPI anchor to protein	IEP	HCCA
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0042765	GPI-anchor transamidase complex	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
CC	GO:0072546	EMC complex	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	HCCA
CC	GO:1905368	peptidase complex	IEP	HCCA
CC	GO:1905369	endopeptidase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000406	Rho_GDI	33	220

External Links

No external refs found!