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  5. Lfl_g21589

Lfl_g21589 (ATHAM3, HAM3, LOM3)


Aliases : ATHAM3, HAM3, LOM3

Description : GRAS-type transcription factor & original description: none


Gene families : OG0002830 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002830_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g21589
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00228020 ATHAM3, HAM3,... RNA biosynthesis.transcriptional activation.GRAS... 0.04 OrthoFinder output from all 47 species
Adi_g045539 ATHAM3, HAM3, LOM3 GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g12093 ATHAM3, HAM3, LOM3 GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g03844 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027680001 ATHAM3, HAM3, LOM3 RNA biosynthesis.transcriptional activation.GRAS... 0.04 OrthoFinder output from all 47 species
Ore_g03890 ATHAM3, HAM3, LOM3 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37422 ATHAM3, HAM3, LOM3 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007302_P001 ATHAM3, HAM3,... transcription factor (GRAS) 0.04 OrthoFinder output from all 47 species
Zm00001e023181_P003 ATHAM3, HAM3,... transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Zm00001e036709_P001 ATHAM3, HAM3,... transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
Zm00001e041505_P001 ATHAM3, HAM3,... transcription factor (GRAS) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 395 764
No external refs found!